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A.2 Explicit Hydrogen Topology Files

A.2.1 RTOPH8

RTOPH8 is basically RTOPH7 converted for symbolic generation. D amino acids are also included.

Title in run:

     *   RESIDUE TOPOLOGY FILE FOR PROTEINS USING EXPLICIT HYDROGEN
     *   ATOMS -- VERSION 7 -- BRB -- 10/24/81
     *   DEVELOPMENTAL VERSION FOR CHARMM_16
     *   RESIDUE 'FRM' AND 'ACE' DELETED  - BRB 10/24/81
     *   BUILDER INFORMATION GIVEN FOR ALL EXPLICIT HYDROGENS - BRB 10/24/81
     *   CONVERTED TO NEW FORMAT - BRB 10/26/81
     *   H bond second antecedants changed to fix ARG and cis peptides DJS 12/26/81

Title in file:

     *   RESIDUE TOPOLOGY FILE FOR PROTEINS USING EXPLICIT HYDROGEN
     *   ATOMS -- VERSION 7 -- BRB -- 10/20/81
     *   BUILDER INFORMATION CORRECT TO DETERMINE ALL EXPLICIT HYDROGENS
     *   H bond second antecdants set to CA for peptides and CD for ARG NE