12.4 Global Options for the CONGEN Command.

The global options control aspects of the entire searching process. See Syntax of Conformational Search, for the syntax of the global options.

• Search Method Options: How the search is performed
• Conformational Search Limits: Limits to the run.
• Maps and Construction Tables: Backbone and sidechain construction
• Energy Calculation Options: Non-bonded energy parameters
• Poisson-Boltzmann Options: Using the Poisson-Boltzmann equation for electrostatics
• Tree Pruning Options: Control of the search tree size
• Checkpoint and Restart Options: Protection against crashes
• Status Display Options: Information provided during the search
• Miscellaneous Global Options: Other options